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MinIONQC

Quality control for ONT (Oxford Nanopore) long reads

https://github.com/roblanf/minion_qc

It uses the sequencing_summary.txt files produced by ONT (Oxford Nanopore Technologies) long-read base-callers to perform QC on the reads. It allows quick-and-easy comparison of data from multiple flowcells

The module parses data in the summary.yaml MinIONQC output files.

File search patterns

minionqc:
contents: total.gigabases
fn: summary.yaml